Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1345 767 0.0 >seq1345 Length=198670 Score = 767 bits (850), Expect = 0.0 Identities = 478/508 (94%), Gaps = 4/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| Sbjct 132895 GTACTCATTCCAATTATAAGACCCAAAAGAGCCCTATATTGTTATTTATTGTCACTACCT 132954 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132955 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 133014 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 133015 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 133074 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 133075 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 133134 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||| Sbjct 133135 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAAGGAGCGGCGAACCGCGTTGG 133194 Query 300 TTTTTTATCTAATAAATACACCCCTTCCGA-AGTCGGGGTTTTTA-GCATGTATTAGCTC 357 |||||||||||||||||||||||||||| | |||||||| ||| | |||||||||||||| Sbjct 133195 TTTTTTATCTAATAAATACACCCCTTCCAAGAGTCGGGGCTTTGATGCATGTATTAGCTC 133254 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct 133255 TAGAATTACCACAGTTATCCATGTAGTAAGATACCATCAAATAAACTATAACTGATTTAA 133314 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||| Sbjct 133315 TGAGCCATTCGCAGTTTCACTGTATAAATTAGTTTATACTTAGACATGCATGGCTTAATC 133374 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 133375 TTTGAGACAAGCATATGACTACTGGCAG 133402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510368810240