Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1112 154 1e-32 seq424 129 5e-25 >seq1112 Length=1085269 Score = 154 bits (170), Expect = 1e-32 Identities = 226/317 (71%), Gaps = 2/317 (1%) Strand=Plus/Plus Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| || | ||| | |||||||| || ||||||| ||||| || Sbjct 231172 GGAGAACATCCACTCTGAAACTTACTCATTGCTCATCGACACCTACATCAAGGAGCCCGC 231231 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | |||||||| |||||| ||||||||||||| || ||| | ||| ||| || || Sbjct 231232 GCAACGTGAATTTTTGTTCGATGCCATCGAGACTATTCCGTGCATCAAGAAGAAGGCTGA 231291 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACG-GCTACATTTGGTGAACGATTGCTGGCAT 61501 ||||| |||| |||||| || | | || | || |||| || || | | |||| Sbjct 231292 CTGGGCGCTCAAGTGGATCTCC-GACCGTCGCTCAACGTTTGCCGAGCGTCTCGTCGCAT 231350 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 |||| | |||||||||| | || ||| || || ||||| | || || ||| | |||| Sbjct 231351 TTGCTGCGGTCGAGGGTATCTTCTTCTCCGGTTCCTTTGCTTCTATTTTCTGGCTCAAGA 231410 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | || ||| | ||||| || ||||| ||| ||| || |||| || || |||||||| | Sbjct 231411 AGCGCGGATTGATGCCTGGCCTGACATTCTCCAACGAACTGATCTCTCGTGACGAGGGAA 231470 Query 61622 TGCATTGTGATTTTGCT 61638 |||| ||||||||| Sbjct 231471 TGCACACCGATTTTGCT 231487 >seq424 Length=76155 Score = 129 bits (142), Expect = 5e-25 Identities = 203/289 (70%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| || |||||||| || ||||| | ||||| || || || || | || Sbjct 60160 AAGAGATCGGGGATCCAGAGCGCATAGAACAAGTCGCGCGCACGAACTTCTTCTTTTCCA 60101 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 |||||||| || | |||||||| || || | || | ||||| || || |||||||| Sbjct 60100 TGATTTTTACGGAGATCGAGGAATTCGAACACATCCGAGTGCCACGGCTCGAGGTAGATA 60041 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTG--TTGA 66521 ||||| | ||| || ||| |||||||||||||| || ||||| | ||| | | Sbjct 60040 GCGAATGCGCCAGGTCGCTTGTTACCACCTTGGTCGACATAACGAGC--CGTTGCATCGT 59983 Query 66522 AGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATC 66581 || |||||| ||| || |||| |||||| | |||||||| || | ||| |||| Sbjct 59982 AGGCACGCAGCATGGGCACGATACCGTTACTGTAACCATTGGTACCTGCAATGTACGATC 59923 Query 66582 CTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 || || || |||| || | || || ||| |||||||| || ||||| Sbjct 59922 CTGTGGCGCGAATATTATGGATATGCAAACCGATACCACCAGCGGTCTT 59874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397557994331600