Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq6 361 1e-97 >seq6 Length=1827 Score = 361 bits (400), Expect = 1e-97 Identities = 271/314 (86%), Gaps = 3/314 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGA-TCCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| || |||| |||||| ||| || || || ||||||| | |||||| | |||||| Sbjct 358 GTCTGGGTGGGCTTTTCCTCTTGGTGAATCGGCGTGCCCTTAATTGGGTGCGTCGGGGAA 299 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACAT 124 ||||||||||||| |||| |||||||||||||||||||||||||| | || ||||||||| Sbjct 298 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATCGCCCGAATACAT 239 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| Sbjct 238 TAGCATGGAATAATAAAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGT 179 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||| |||| | |||||||| ||| ||||||||||||||||| Sbjct 178 AATGATTAATAGGGACAGTTGGGGACATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGG 119 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||| ||||||||||||| ||||||||| || ||||||||||||||||||||| || Sbjct 118 ATTTACTGAAGACTAACTATTGCGAAAGCATTTGTCAAGGATGTTTTCATTAATCA-AGA 60 Query 305 ACGAAAGTTAGGGG 318 ||||| |||||||| Sbjct 59 ACGAAGGTTAGGGG 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915139203264