Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq281 329 6e-88 >seq281 Length=7449 Score = 329 bits (364), Expect = 6e-88 Identities = 251/294 (85%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 17 GCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 ||||| ||| |||| || | || ||| |||| ||||||||| | | |||||||||| Sbjct 1691 GCCTTACCTCCTGGTGAACGGCGATGTCCTTTACTGGGTGTCGTCGCAAACCAGGACTTT 1750 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1751 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCCCGAATACATTAGCATGGAAT 1810 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 |||| ||||||||| ||| | | ||||||||||||||| || ||||||||||||||||| Sbjct 1811 AATAAAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGATTAATA 1870 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 |||||||| ||||| | |||||| | ||||||||||||||||||||||| |||| Sbjct 1871 GGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCCGGAAG 1930 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 || ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 1931 ACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 1983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915190536832