Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 4e-17 >seq2 Length=26691 Score = 95.1 bits (104), Expect = 4e-17 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 105 CAGTGCTCTACCTCCGGGAAGA-AACACGCGACGCTGCACCTAAATGCATTTCGGGGAGA 163 ||||||| ||||| | ||| |||| |||||||||| ||||||||||| |||| Sbjct 24441 CAGTGCTGTACCTACCATAAGCTAACATT-GACGCTGCACTGCAATGCATTTCGCAGAGA 24383 Query 164 ACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTT 223 |||||||||||| || |||| || |||||| |||||||||||||||||| | | Sbjct 24382 ACCAGCTATCACATCTTTAGATTAGCATTTCACTCCTATCCACAGGTCATCCAAGTACTA 24323 Query 224 TTCAACCTAAGTGGGTTCGGTCCT 247 | |||| || ||||||||||| Sbjct 24322 TGCAACGTACACTGGTTCGGTCCT 24299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817581206016