Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq281 165 1e-38 >seq281 Length=7449 Score = 165 bits (182), Expect = 1e-38 Identities = 160/198 (81%), Gaps = 7/198 (4%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||| ||||||||||||||||||||| Sbjct 1852 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTTTATTATTCCATGCTAATGTAT 1794 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||||||||||||| | Sbjct 1793 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTTGCGA 1734 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTAC 178 | ||| ||| | |||| ||| | |||||| |||||| |||| || || ||||| Sbjct 1733 CGACAC-CCAGTAAAGGACATCGCCGTTCACCAGGAGGTAAGGCTCCGTCAAACAAGTAC 1675 Query 179 TCGCCGTG-AGGCGGACC 195 | || | ||||||||| Sbjct 1674 ACACCAAGAAGGCGGACC 1657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595194037956