Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq2 78.8 2e-12 >seq2 Length=26691 Score = 78.8 bits (86), Expect = 2e-12 Identities = 107/143 (75%), Gaps = 6/143 (4%) Strand=Plus/Minus Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321 ||||| |||||| |||||| ||||| || ||||| |||||||| || || || ||| | Sbjct 24701 GACCACTGAGCTGTTACGCTTTCTTTAAATGATGGACGCTTCCAATCCCACATCATGGCT 24642 Query 322 GTCTAC-GCAACTCCACATCCTT--TCCCACTGAGTCACCA-CTTAGGGGCCTTAGCTGA 377 ||||| |||| | ||| ||||| | |||| |||| | ||| ||| ||||| | | Sbjct 24641 GTCTAAAGCAA-TGCACTTCCTTAATTTCACTT-GTCAATATCTTTGGGACCTTAACACA 24584 Query 378 TGATCTGGGCTGTTTCCCTCTCG 400 | |||||||||||||||||| Sbjct 24583 CTGTTTGGGCTGTTTCCCTCTCG 24561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177587823616