Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq1015 96.9 7e-18 >seq1015 Length=26647 Score = 96.9 bits (106), Expect = 7e-18 Identities = 157/222 (71%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||||||||||| | | || |||||||||||| ||||||| ||| ||| Sbjct 14781 TCGCCGTGGTTGCCCTGGTGACCGGTCGTGCCGAACAGGCGTTCCTTGAGGATCGGGTCG 14840 Query 110 -CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCT---TGTCACTGAACCC 165 ||| ||||||||| ||| || | | | || | |||| | |||| || || Sbjct 14841 ACGC-CGTTCCACATGGCGAG---CGAGAAGCAGAGGCGCGCATGGTTGTCCGAGAGTCC 14896 Query 166 CGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTA 225 || | |||||| || ||||| ||||||||||| ||| || ||||| || ||||| | Sbjct 14897 GGCGATGCCGTCTTCTCCCCAGCGGTAGGCGCGAGAGCGGGCGTGGTCGTGCGGGAAATG 14956 Query 226 GGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGT 267 | ||| |||||||| | ||| |||||| ||||| ||||| Sbjct 14957 AGTCCACGCGTCGCCGTTGGCCGAGTAGTCCTCGCGGACCGT 14998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007989577280