Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq2 127 5e-27 >seq2 Length=26691 Score = 127 bits (140), Expect = 5e-27 Identities = 162/220 (74%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| | || |||||| ||| |||| | |||| | | |||| |||| ||||||| || Sbjct 22397 GAATTTCGAGAGTAGCGCTGATATGCTTTGATACTTGAAGGACTACCAATGGCGAAAGCA 22338 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | | || | | | ||||||||||| ||||||||| |||||||||||| ||||||| Sbjct 22337 GGTAACTAGTTAGAGATTGACACTGAGGTACGAAAGCGTAGGGAGCAAACAGAATTAGAT 22278 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 || ||||||||| |||| |||||| |||| | |||| | | |||| || | | Sbjct 22277 ACTCTGGTAGTCTACGCTGTAAACTATGAGTGCTAGTATTTTG---TCATA--TGATGAG 22223 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||||||||||||||| | ||| |||||| |||| Sbjct 22222 AT-TCTTAGCAAACGCAATAAGCACTCCGCCTGGGAAGTA 22184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203187558912