Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq2 77.0 1e-11 >seq2 Length=26691 Score = 77.0 bits (84), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 303 GGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAG 362 || |||||| | ||||| ||||||| | ||||||| || | || || | | Sbjct 24528 GGCAGTGAGTCCTAGGGTGATAAGGTCTTAGGACGAGAGGGAAACAGCCCAAACAGTGTG 24587 Query 363 CTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA-AGACAGCTA 421 ||||| ||| || | | |||| ||| ||| ||||| |||||| ||||||| | Sbjct 24588 TTAAGGTCCCAAAGATATTGACAAGTGAAATTAAGGAAGTGC-ATTGCTTTAGACAGCCA 24646 Query 422 GGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 ||||| || |||||||| |||| |||||||||| ||||||||||||| | ||| Sbjct 24647 TGATGTGGGATTGGAAGCGTCCAT-CATTTAAAGAAAGCGTAACAGCTCAGTGGTC 24701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689582529536