Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq281 143 4e-32 >seq281 Length=7449 Score = 143 bits (158), Expect = 4e-32 Identities = 208/283 (73%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | |||||||| |||||||||||| || | |||| | Sbjct 6330 GTACGAGAGGAACCGTTGA-TTC-GCGTAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 6387 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||| | Sbjct 6388 GCCGCGAAGCTACCACGCGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 6447 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC-CCCG 177 ||| | |||| | ||| ||| ||| ||||| || |||| |||||||| | Sbjct 6448 GAA-ACGATGATGTTAGTCCCGCAAATCTCAGTCGAGTAAAGATAGAGCTTCGGCTCGTA 6506 Query 178 AACCTTAGCAGGCCGGCAACGGGC-GTCCCGCGGAAGCGCGGGGC-GCTCAGCTGGCGGA 235 |||| ||| ||| || | | | || |||||| || || | || | |||| | Sbjct 6507 AACCATAGTTGGCTGGTCATGTTCTGTAGGGCGGAAAGGCCTTGCAGTTCTACCGGCGAA 6566 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | ||| | | || || ||| ||||||||||||||||||| Sbjct 6567 TAGCATTCGAAATATTTGCGGGGGTAAATCCTTTGCAGACGAC 6609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819191794176