Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1721 87.8 1e-12 >seq1721 Length=37294 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 61700 TTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTC-ACTC 61758 |||| || ||||| || ||||| || || |||| ||||| | ||| | || | | Sbjct 36554 TTCGAGAAGCGGTCGAAATTGAACAAGAGTTCTTGACGGACGCCCT-CCCTTGTCGATTA 36612 Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTG 61818 ||||| ||||| | || | | |||| || || || || || ||||| || || || | Sbjct 36613 ATCGGAATGAACTCTGAATTGATGTGTCAATACATCGAGTTCGTTGCTGATCGACTCCTC 36672 Query 61819 GTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878 ||| | | |||| ||| ||| || || | | | ||||| || ||||||||||||||| Sbjct 36673 GTCTCTCTCGGTAACAAGAAGATTTACAACAAGGAGAACCCCTTCGATTTCATGGACATG 36732 Query 61879 ATTTCGCTGGATGGCAAGAC 61898 || ||| |||| || ||||| Sbjct 36733 ATCTCGATGGAGGGAAAGAC 36752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397553987218880