Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1721 87.8 1e-12
>seq1721
Length=37294
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 61700 TTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTC-ACTC 61758
|||| || ||||| || ||||| || || |||| ||||| | ||| | || | |
Sbjct 36554 TTCGAGAAGCGGTCGAAATTGAACAAGAGTTCTTGACGGACGCCCT-CCCTTGTCGATTA 36612
Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTG 61818
||||| ||||| | || | | |||| || || || || || ||||| || || || |
Sbjct 36613 ATCGGAATGAACTCTGAATTGATGTGTCAATACATCGAGTTCGTTGCTGATCGACTCCTC 36672
Query 61819 GTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878
||| | | |||| ||| ||| || || | | | ||||| || |||||||||||||||
Sbjct 36673 GTCTCTCTCGGTAACAAGAAGATTTACAACAAGGAGAACCCCTTCGATTTCATGGACATG 36732
Query 61879 ATTTCGCTGGATGGCAAGAC 61898
|| ||| |||| || |||||
Sbjct 36733 ATCTCGATGGAGGGAAAGAC 36752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397553987218880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |