Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq1827 140 4e-28 >seq1827 Length=8425 Score = 140 bits (154), Expect = 4e-28 Identities = 234/331 (71%), Gaps = 8/331 (2%) Strand=Plus/Plus Query 162511 GAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGG 162570 || || ||||| | || || || |||||||| || || || ||||| || | |||||| Sbjct 2102 GAGACTACTCCCTTCTACCCTCGTTCCCCTTACGGTGTAGCGAAACTCTACGCTTTCTGG 2161 Query 162571 ATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAAT 162630 ||| |||| |||||| | ||| ||| | || | ||| | | |||||| || ||||| Sbjct 2162 ATCGTCAAGAACTACCGTGAATCCTACGGAATGTACGCCGCCAACGGTATCCTCTTCAAC 2221 Query 162631 CACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTC- 162689 |||||| | || | ||| || |||||||| || |||||| || || |||| Sbjct 2222 CACGAATCTCCTCGACGTGGACGAACTTTCGTCACCCGAAAGATCTCTCGTGC--TGTCG 2279 Query 162690 CCGAATTAGTG-TGGGACTCCAA-AGTGA-TCTACAACTTGGAAACCTCAATGCCCGACG 162746 ||||| | | | || | ||| |||| ||||| || || ||| | | ||| || Sbjct 2280 CCGAAATCTCGCTCGGGCAACAAGAGTGCCTCTAC--CTCGGTAACTTGGACGCCAAGCG 2337 Query 162747 TGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAA 162806 ||| |||||||||||| |||||||| |||| ||||||| |||||||| ||||| | Sbjct 2338 TGATTGGGGACACGCCCGTGACTACGTCGAGGGTATGTGGCGTATGCTTCAACAAGACGA 2397 Query 162807 GCCAGATGATTATGTGATCGCAACTGGTGAG 162837 ||| ||||||| || |||| ||||| ||| Sbjct 2398 GCCCGATGATTTCGTTCTCGCCACTGGAGAG 2428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691434203749920