Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq26 93.3 9e-17 >seq26 Length=217270 Score = 93.3 bits (102), Expect = 9e-17 Identities = 156/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||||||||||| | | || |||||||||||| ||||||| ||| ||| Sbjct 195737 TCGCCGTGGTTGCCCTGGTGACCGGTCGTGCCGAACAGGCGTTCCTTGAGGATCGGGTCG 195796 Query 110 -CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCT---TGTCACTGAACCC 165 ||| | ||||||| ||| || | | | || | |||| | |||| || || Sbjct 195797 ACGC-CATTCCACATGGCGAG---CGAGAAGCAGAGGCGCGCGTGGTTGTCCGAGAGGCC 195852 Query 166 CGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTA 225 || | |||||| || ||||| ||||||||||| ||| || ||||| || ||||| | Sbjct 195853 GGCGATGCCGTCTTCTCCCCAGCGGTAGGCGCGAGAGCGGGCGTGGTCGTGCGGGAAATG 195912 Query 226 GGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGT 267 | ||| |||||||| | ||| |||||| ||||| ||||| Sbjct 195913 AGTCCACGCGTCGCCGTTGGCCGAGTAGTCCTCGCGGACCGT 195954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007998427520