Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 4e-15 seq17 91.5 6e-13 >seq6 Length=667699 Score = 98.7 bits (108), Expect = 4e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 349036 GTAGACCGACGCATTGGGCTTCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTGAGTCT 349095 |||||||| || ||| |||| | ||| | | ||| || |||||||||||| | Sbjct 472233 GTAGACCGTCGTCGACGGCGTCTTGAGGTTGACGGCGACGTTGATAATCTCCTTGAGACG 472174 Query 349096 GGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGT 349155 || | || || || |||||||||| || ||| ||||| ||||||| || | ||| || Sbjct 472173 CGGGACACCGAGCGTGACGTTCTTGGACGAGACACCGGCGTAGTGGAACGTGTTGAGCGT 472114 Query 349156 CAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGG 349215 || |||||| ||||| ||||| |||| | |||||| | || |||||| ||||| Sbjct 472113 CATCTGCGTCGCCGGCTCACCGATCGACTGCGCGGCGAGGGTTCCGCACATCTCTCCGGG 472054 Query 349216 CGCG 349219 |||| Sbjct 472053 CGCG 472050 >seq17 Length=321613 Score = 91.5 bits (100), Expect = 6e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 |||||||| | || || |||||| ||||||||| | | || ||||||||||||||||| Sbjct 79100 CTCGAGCATCTTGCCGACGGTCATACGCGACGGGAAACCGTGAGGGTTCATGATGATGTC 79041 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGAC 449106 ||| ||| ||||||| ||||||||||| | ||| | || ||| || Sbjct 79040 GGGGCAGATGCCTTGGTCGTTGAACGGCATGTCCTCCTGCGGGACGATGAGACCGCAAAC 78981 Query 449107 GCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGG 449151 |||||||| ||||| || | |||||||||| || | ||||| Sbjct 78980 ACCCTTCTGTCCGTGACGCGAGGAGAACTTGTCGCCGAGTTCGGG 78936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084734931496488