Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq29 95.1 5e-14 >seq29 Length=197879 Score = 95.1 bits (104), Expect = 5e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 ||| || ||||| || || || |||| | | ||||||||||| | ||| ||| ||||| Sbjct 180927 ACCGATCGTCATGCGCGACGGGATGGCGTGCGGGTTGATGATCAAGTCGGGCGTGATGCC 180986 Query 364483 GTCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || | ||| ||||| || ||| || | | ||| ||| || |||||||| || | Sbjct 180987 CTCGGCCGAAAACGGCATGTCCTCGTGACGGTAGGTGATACCGATCGTTCCCTTCTGACC 181046 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| ||||||||||||||||| Sbjct 181047 GTGTCGAGACGCAAACTTGTCGCCAAT 181073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884882632583308