Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988805.1_202015-05- 06] 245 sequences; 20,278,264 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq101 185 1e-44 >seq101 Length=8534 Score = 185 bits (204), Expect = 1e-44 Identities = 108/112 (96%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8534 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 8475 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| ||| | ||||||||||||||||||||||||| Sbjct 8474 GAACGGCCATGCACCACCAACCACAAGATCAAGAAAGAGCTATCAATCTGTC 8423 Score = 172 bits (190), Expect = 9e-41 Identities = 125/145 (86%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 145 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 86 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| ||| | || ||||||||||||||||| |||| Sbjct 85 CCTGTTATTGCCTCAAACTTCCATCAGCTAAACGCTGATAGTCCCTCTAAGAAGACAGCA 26 Query 122 ACCAACCATAGTCGATGGGGCTATT 146 | | ||| || || || ||||| Sbjct 25 GCTAGCCAAAGCCGGCTGGTCTATT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798108845