Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05- 06] 218 sequences; 20,361,044 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1 167 3e-39 >seq1 Length=8831 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 2086 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 2028 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 2027 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 1968 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 1967 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 1924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198743012