Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05- 06] 218 sequences; 20,361,044 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1 223 4e-56 seq83 161 1e-37 >seq1 Length=8831 Score = 223 bits (246), Expect = 4e-56 Identities = 161/185 (87%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 1973 AACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCCCGAATACA 2032 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || || Sbjct 2033 TTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-CC 2091 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | |||||| | |||| ||||||||||||| Sbjct 2092 GTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTT 2151 Query 183 GGATT 187 ||||| Sbjct 2152 GGATT 2156 >seq83 Length=5474 Score = 161 bits (178), Expect = 1e-37 Identities = 111/124 (90%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 |||||||||||||||||||||| ||||||||||||| ||||||||||||| | ||||| Sbjct 5059 ATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATC-GTAAT 5117 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 5118 GATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 5177 Query 188 TATT 191 |||| Sbjct 5178 TATT 5181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998918720