Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001255795.1_202015-07- 26] 30 sequences; 20,810,536 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq30 96.9 2e-18 seq28 96.9 2e-18 seq27 96.9 2e-18 seq26 96.9 2e-18 seq23 96.9 2e-18 seq22 96.9 2e-18 seq19 96.9 2e-18 seq18 96.9 2e-18 seq13 96.9 2e-18 >seq30 Length=25024 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 6944 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 6889 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 6888 TACAAAGGGCAGGGACGTAAT-CAACGC 6862 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 15724 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 15669 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 15668 TACAAAGGGCAGGGACGTAAT-CAACGC 15642 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 24522 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 24467 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 24466 TACAAAGGGCAGGGACGTAAT-CAACGC 24440 >seq28 Length=17304 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Plus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 566 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 621 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 622 TACAAAGGGCAGGGACGTAAT-CAACGC 648 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Plus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 9367 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 9422 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 9423 TACAAAGGGCAGGGACGTAAT-CAACGC 9449 >seq27 Length=20541 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 8824 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 8769 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 8768 TACAAAGGGCAGGGACGTAAT-CAACGC 8742 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 17631 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 17576 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 17575 TACAAAGGGCAGGGACGTAAT-CAACGC 17549 >seq26 Length=30062 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 9454 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 9399 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 9398 TACAAAGGGCAGGGACGTAAT-CAACGC 9372 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 18265 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 18210 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 18209 TACAAAGGGCAGGGACGTAAT-CAACGC 18183 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 27077 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 27022 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 27021 TACAAAGGGCAGGGACGTAAT-CAACGC 26995 Score = 87.8 bits (96), Expect = 1e-15 Identities = 65/71 (92%), Gaps = 4/71 (6%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| ||||||||| |||||||||| Sbjct 646 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAA-GGCAGGGACG 590 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 589 TAAT-CAACGC 580 >seq23 Length=14849 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 2926 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 2871 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 2870 TACAAAGGGCAGGGACGTAAT-CAACGC 2844 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 11726 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 11671 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 11670 TACAAAGGGCAGGGACGTAAT-CAACGC 11644 >seq22 Length=20396 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 6737 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 6682 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 6681 TACAAAGGGCAGGGACGTAAT-CAACGC 6655 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 15547 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 15492 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 15491 TACAAAGGGCAGGGACGTAAT-CAACGC 15465 >seq19 Length=18910 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 4315 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 4260 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 4259 TACAAAGGGCAGGGACGTAAT-CAACGC 4233 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 13130 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 13075 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 13074 TACAAAGGGCAGGGACGTAAT-CAACGC 13048 >seq18 Length=352506 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 336780 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 336725 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 336724 TACAAAGGGCAGGGACGTAAT-CAACGC 336698 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 345584 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 345529 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 345528 TACAAAGGGCAGGGACGTAAT-CAACGC 345502 >seq13 Length=784862 Score = 96.9 bits (106), Expect = 2e-18 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| | || | |||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 780661 AGCCAATCCGGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 780606 Query 92 TACAAAGGGCAGGGACGTAATACAACGC 119 ||||||||||||||||||||| |||||| Sbjct 780605 TACAAAGGGCAGGGACGTAAT-CAACGC 780579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799915400