Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001255795.1_202015-07- 26] 30 sequences; 20,810,536 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq30 167 3e-39 seq28 167 3e-39 seq27 167 3e-39 seq26 167 3e-39 seq23 167 3e-39 seq22 167 3e-39 seq19 167 3e-39 seq18 167 3e-39 seq13 167 3e-39 >seq30 Length=25024 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 6111 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 6053 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 6052 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 5993 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 5992 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 5949 Score = 165 bits (182), Expect = 1e-38 Identities = 139/164 (85%), Gaps = 5/164 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| |||||||||| |||||||||||||||||||| Sbjct 23684 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTC-ATTATTCCATGCTAATGTAT 23627 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG-TTCCTC 121 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||| || | Sbjct 23626 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 23567 Query 122 CGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 || |||||| |||||| ||| | |||||| |||||| |||| Sbjct 23566 CG-ACACCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 23524 Score = 156 bits (172), Expect = 5e-36 Identities = 138/165 (84%), Gaps = 7/165 (4%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 14887 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 14829 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 || ||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 14828 TC-GGCAAAGGCCTGCTTTGAACACTCTAATTTT-TCAAAGTAAACGTCCTGGTTTGCAA 14771 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 14770 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 14727 >seq28 Length=17304 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Plus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 1401 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 1459 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 1460 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 1519 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 1520 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 1563 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Plus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 10205 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 10263 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 10264 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 10323 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 10324 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 10367 >seq27 Length=20541 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 7985 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 7927 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 7926 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 7867 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 7866 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 7823 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 16791 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 16733 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 16732 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 16673 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 16672 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 16629 >seq26 Length=30062 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 8615 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 8557 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 8556 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 8497 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 8496 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 8453 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 17426 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 17368 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 17367 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 17308 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 17307 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 17264 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 26237 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 26179 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 26178 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 26119 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 26118 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 26075 >seq23 Length=14849 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 2091 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 2033 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 2032 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 1973 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 1972 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 1929 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 10887 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 10829 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 10828 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 10769 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 10768 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 10725 >seq22 Length=20396 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 5897 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 5839 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 5838 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 5779 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 5778 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 5735 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 14708 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 14650 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 14649 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 14590 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 14589 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 14546 >seq19 Length=18910 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 3475 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 3417 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 3416 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 3357 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 3356 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 3313 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 12290 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 12232 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 12231 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 12172 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 12171 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 12128 >seq18 Length=352506 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 335940 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 335882 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 335881 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 335822 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 335821 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 335778 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 344745 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 344687 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 344686 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 344627 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 344626 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 344583 >seq13 Length=784862 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 779821 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 779763 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 779762 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 779703 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 779702 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 779659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199827020