Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001255795.1_202015-07- 26] 30 sequences; 20,810,536 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq11 104 5e-20 >seq11 Length=938730 Score = 104 bits (114), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 10/227 (4%) Strand=Plus/Minus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||||||||||| | | | | |||||| ||||||||||||| ||| ||| Sbjct 355618 TCGCCGTGGTTGCCCTGGTGGCCTGTGACGCCGAAGAGGCGCTCCTTGAGGATCGGGTCG 355559 Query 110 -CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCC----TTGTCACTGAACC 164 ||| ||||||||| ||| || | |||| || ||| ||||| | || | Sbjct 355558 ACGC-CGTTCCACATGGCGAGCGAGAAGCACAGTCG----GCCGTGGTTGTCGCACAAGC 355504 Query 165 CCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGT 224 | || | ||||||||||||||| ||||| ||||| ||| || || || || ||||| | Sbjct 355503 CGGCGATGCCGTCCTCGCCCCAGCGGTACGCGCGCGAGCGGGCGTGCTCGTGCGGGAAAT 355444 Query 225 AGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCC 271 | |||||||||||| | || |||||| ||||| |||||| || Sbjct 355443 GCGTCCAGGCGTCGCCGTTCGCCGAGTAGTCCTCGCGGACCGTGGCC 355397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999697600