Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq38 334 1e-89 >seq38 Length=22345 Score = 334 bits (370), Expect = 1e-89 Identities = 252/294 (86%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 17 GCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 ||||| ||| |||| || | || ||| |||||||||||||| | | ||||||| || Sbjct 6968 GCCTTACCTCCTGGTGAACAGCGATGTCCTTCACTGGGTGTCGTTGCAAACCAGGACGTT 7027 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 7028 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCCCGAATACATTAGCATGGAAT 7087 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 |||||||||||||| ||| | | ||||||||||||||| || ||||||||||||||||| Sbjct 7088 AATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGATTAATA 7147 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 |||||||| ||||| | |||||| | ||||||||||||||||||||||| |||| Sbjct 7148 GGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCCGGAAG 7207 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 || ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 7208 ACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 7260 Score = 334 bits (370), Expect = 1e-89 Identities = 252/294 (86%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 17 GCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 ||||| ||| |||| || | || ||| |||||||||||||| | | ||||||| || Sbjct 15503 GCCTTACCTCCTGGTGAACAGCGATGTCCTTCACTGGGTGTCGTTGCAAACCAGGACGTT 15562 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 15563 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCCCGAATACATTAGCATGGAAT 15622 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 |||||||||||||| ||| | | ||||||||||||||| || ||||||||||||||||| Sbjct 15623 AATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGATTAATA 15682 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 |||||||| ||||| | |||||| | ||||||||||||||||||||||| |||| Sbjct 15683 GGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCCGGAAG 15742 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 || ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 15743 ACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 15795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915196659520