Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq38 356 4e-96 >seq38 Length=22345 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7769 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 7710 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| ||| | || ||||||||||||||||| |||| Sbjct 7709 CCTGTTATTGCCTCAAACTTCCATCAGCTAAACGCTGATAGTCCCTCTAAGAAGACAGCA 7650 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | | ||| || || || |||||||||||||||||||||||||||||||||||||||| Sbjct 7649 GCTAGCCAAAGCCGGCTGGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 7590 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 7589 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAGATCAAGAA 7530 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 7529 AGAGCTATCAATCTGTC 7513 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16304 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 16245 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| ||| | || ||||||||||||||||| |||| Sbjct 16244 CCTGTTATTGCCTCAAACTTCCATCAGCTAAACGCTGATAGTCCCTCTAAGAAGACAGCA 16185 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | | ||| || || || |||||||||||||||||||||||||||||||||||||||| Sbjct 16184 GCTAGCCAAAGCCGGCTGGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 16125 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 16124 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAGATCAAGAA 16065 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 16064 AGAGCTATCAATCTGTC 16048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797182565