Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq38 167 3e-39 >seq38 Length=22345 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 7129 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 7071 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 7070 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 7011 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 7010 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 6967 Score = 167 bits (184), Expect = 3e-39 Identities = 139/165 (84%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 3 TCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT 62 |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||| Sbjct 15664 TCTC-AGAAACCAACAAAATGGGAACGCGCGTCCTATTCTATTATTCCATGCTAATGTAT 15606 Query 63 TCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT--CCT 120 |||||| | |||||||||||||||||||||||| |||| ||||| ||||||||| | Sbjct 15605 TCGGGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTCCTGGTTTGCAA 15546 Query 121 CCGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTAGGGCT 164 | ||| ||| |||||| ||| | |||||| |||||| |||| Sbjct 15545 CGACAC-CCAGTGAAGGACATCGCTGTTCACCAGGAGGTAAGGCT 15502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197895410