Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01- 27] 137 sequences; 21,492,894 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4 630 2e-178 >seq4 Length=1779 Score = 630 bits (698), Expect = 2e-178 Identities = 449/510 (88%), Gaps = 8/510 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| |||||||| |||||||||| || ||||||||||||||| || Sbjct 1206 GTACTCATTCCAATTGCAAGACCCGTAAGAGCCCTGCATTGTTATTTATTGTCACTATCT 1147 Query 61 CCCC---GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT-TCCTTGGATGTGGTAGC 116 | | |||| | | || ||||||||||||||||||| | ||||| || || || Sbjct 1146 CGGCAAAGTGTTGCCAGGGGATAATTTGCGCGCCTGCTGCGTGTCCTTAGACCTGAGGGC 1087 Query 117 CGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176 |||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||| Sbjct 1086 CGTTTCTCAGGCCCTCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTCATCACCAT 1027 Query 177 GGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 |||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||| Sbjct 1026 GGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTCGAATGAAGCATCGCC 967 Query 237 GGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGT 296 ||| ||||||||||||||||| |||||| |||| ||||||||||| |||||||| ||| Sbjct 966 GGCACAAGGCCATGCGATTCGAGCAGTTATCATGATTCACCAAGGAGACCCGAAGGCCGT 907 Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTT-AGCATGTATTAG 354 ||||||| |||||||||||||| ||||||| ||||||||| ||||| |||||||||||| Sbjct 906 TGGTTTTGGATCTAATAAATACATCCCTTCCAGAAGTCGGGATTTTTCAGCATGTATTAG 847 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 ||||||||||||||| ||||||||||||||||||||| |||||||| || || ||||||| Sbjct 846 CTCTAGAATTACCACAGTTATCCATGTAGTAAGGTACCATCAAATAGACTATGACTGATT 787 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| Sbjct 786 TAATGAGCCATTCGCAGTTTCACTGTTT--ATTGCTTAAACTTAGACATGCATGGCTTAA 729 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 728 TCTTTGAGACAAGCATATGACTACTGGCAG 699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397930752