Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01- 27] 61 sequences; 20,750,089 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq25 544 3e-152 >seq25 Length=6642 Score = 544 bits (602), Expect = 3e-152 Identities = 537/692 (78%), Gaps = 63/692 (9%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| | | ||||||||||||||||||||||||||||||||| || |||| ||||||| Sbjct 3497 TGTGATACACTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAATTGGGTGGTAAAT 3556 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 3557 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 3616 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||| Sbjct 3617 TGAAAAGCACTTTGGAAAGAGAGTTAAAA-GTACGTGAAATTGTTGGAAGGGAAACGCTT 3675 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | | ||||||||| |||| ||| | ||| | || ||| Sbjct 3676 GAAGTCAGACTTGC------TTGC-------------CGGGCT-TGCTCGGTT-TGC--- 3711 Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 ||||||||||||| | || ||||||| ||| |||||| || || || Sbjct 3712 -AGGCCAGCATCAGTTTTCCGGGGCGGATAATGGCAGTTAGAATGTAGCAGTCTC--GGC 3768 Query 323 GGTGTTATAGC-----------------CCGGGGT-----GGAATGCGGCCCGCC---TG 357 |||||||||| | |||| |||| || || ||| || Sbjct 3769 TGTGTTATAGCTTTCTGCTGGATACGTCCTGGGGGACTGAGGAACGCAGCGTGCCGTATG 3828 Query 358 GACTGAGGTCCGCGCTCCG-----GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCG 411 | |||| | || ||| ||| |||||||||| | ||||| | ||| || |||| Sbjct 3829 GC--GAGGGCTTCGGTCCTTTCACGCTTAGGATGCTGGTGGAATGGCTTTAAACGACCCG 3886 Query 412 TCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTG 471 ||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 3887 TCTTGAAACACGGACCAAGGAGTCTAACATGCTTGCGAGTATTTGGGTGTCAAACCCGGA 3946 Query 472 CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGA 531 |||||||||||||||| ||||||||||| | | | ||||||||||||||||| || Sbjct 3947 TGCGTAATGAAAGTGAATGGAGGTGGGAAGCGC--AAGCTGCACCATCGACCGATCTGGA 4004 Query 532 TGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTAT 591 | | | |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 4005 TTTTCTAAGATGGATTTGAGTAAGAGCACGTATGTTGGGACCCGAAAGATGGTGAACTAT 4064 Query 592 GCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGC 651 |||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 4065 GCCTGAATAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGC 4124 Query 652 AAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||||||||||| Sbjct 4125 AAATCGATCGTCAAATTTGGGTATAGGGGCGA 4156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998691550