Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01- 27] 61 sequences; 20,750,089 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq25 143 4e-32 >seq25 Length=6642 Score = 143 bits (158), Expect = 4e-32 Identities = 208/283 (73%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | |||||||| |||||||||||| || | |||| | Sbjct 6248 GTACGAGAGGAACCGTTGA-TTC-GCGTAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 6305 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||| | Sbjct 6306 GCCGCGAAGCTACCACGCGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 6365 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC-CCCG 177 ||| | |||| | ||| ||| ||| |||||| || |||| |||||||| | Sbjct 6366 GAA-ACGATGATGTTAGTCCCGCAAATCTTAGTCGAGTAAAGATAGAGCTTCGGCTCGTA 6424 Query 178 AACCTTAGCAGGCCGGCAACGGGC-GTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||| ||| || ||| | | |||| ||| | | | || | |||| | Sbjct 6425 AACCATAGTTGGCTGGTCACGTTCTGCAGGGCGGAAAGGCCTTGTAGTTCTACCGGCGAA 6484 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | ||| | | || || ||| ||||||||||||||||||| Sbjct 6485 TAGCATTCGAAATATTTGCGGGGGTAAATCCTTTGCAGACGAC 6527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199515904