Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01- 27] 61 sequences; 20,750,089 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq25 630 2e-178 >seq25 Length=6642 Score = 630 bits (698), Expect = 2e-178 Identities = 449/510 (88%), Gaps = 8/510 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| |||||||| |||||||||| || ||||||||||||||| || Sbjct 1442 GTACTCATTCCAATTGCAAGACCCGTAAGAGCCCTGCATTGTTATTTATTGTCACTATCT 1383 Query 61 CCCC---GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT-TCCTTGGATGTGGTAGC 116 | | |||| | | || ||||||||||||||||||| | ||||| || || || Sbjct 1382 CGGCAAAGTGTTGCCAGGGGATAATTTGCGCGCCTGCTGCGTGTCCTTAGACCTGAGGGC 1323 Query 117 CGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176 |||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||| Sbjct 1322 CGTTTCTCAGGCCCTCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTCATCACCAT 1263 Query 177 GGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 |||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||| Sbjct 1262 GGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTCGAATGAAGCATCGCC 1203 Query 237 GGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGT 296 ||| ||||||||||||||||| |||||| |||| ||||||||||| |||||||| ||| Sbjct 1202 GGCGCAAGGCCATGCGATTCGAGCAGTTATCATGATTCACCAAGGAGACCCGAAGGCCGT 1143 Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTT-AGCATGTATTAG 354 ||||||| |||||||||||||| ||||||| ||||||||| ||||| |||||||||||| Sbjct 1142 TGGTTTTGGATCTAATAAATACATCCCTTCCAGAAGTCGGGATTTTTCAGCATGTATTAG 1083 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 ||||||||||||||| ||||||||||||||||||||| |||||||| || || ||||||| Sbjct 1082 CTCTAGAATTACCACAGTTATCCATGTAGTAAGGTACCATCAAATAGACTATGACTGATT 1023 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| Sbjct 1022 TAATGAGCCATTCGCAGTTTCACTGTTT--ATTGCTTAAACTTAGACATGCATGGCTTAA 965 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 964 TCTTTGAGACAAGCATATGACTACTGGCAG 935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399078656