Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01-
27] 61 sequences; 20,750,089 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq11 250 2e-61
seq59 95.1 1e-14
seq15 82.4 6e-11
>seq11
Length=389204
Score = 250 bits (276), Expect = 2e-61
Identities = 394/560 (70%), Gaps = 6/560 (1%)
Strand=Plus/Minus
Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372
||| || || | ||| || ||||| ||| || || || || ||||||||||| ||||
Sbjct 262040 CCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGAATCCAGAGGGCAAAGAA 261981
Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432
| ||||| || || |||||| ||||||| || ||||| | |||||||||||| ||
Sbjct 261980 CAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAA 261921
Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492
||||||||| ||||| || || |||||||||||||||| |||| || ||| ||| ||
Sbjct 261920 GATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCGCC 261861
Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552
|||||||||||||| ||| |||||| | || || | ||| || | || ||||| ||
Sbjct 261860 CTGGTCGACGTAGCGCGCGGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCGA 261801
Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612
| ||| || |||||| ||||| || || || || || | ||| | |||||
Sbjct 261800 GTAGCCGTTCGTGCCGGCGATGTACGAGCCGGTCGCGCGGATGTTGTGGATCGAGAGACC 261741
Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCG 66670
|| || ||||||||||| |||||| ||| | || | | || | | |||||
Sbjct 261740 GATGCCGCCGGCCGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTGTCGTAGATGCCC 261683
Query 66671 TCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTG 66730
|| || ||||| |||| || || | |||| |||| || || || || | || |||
Sbjct 261682 TCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGGCGTG 261623
Query 66731 GCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTAC 66790
|||| |||||| || || | |||||||||||||| | |||||| ||||||
Sbjct 261622 CCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTAAAGTACCGCTCCGACATGAGGTTGTAC 261563
Query 66791 GTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAG 66849
|||||||| | ||||||| ||||| || || |||| || ||| ||||| || |
Sbjct 261562 GTCTCGATCGCGCGCTCAATGTCGTCGCCGTGGATGCCGACCGCGACA-CGCATGAGCAT 261504
Query 66850 GTATTGAGGCCGTTCGACCA 66869
|| || || || ||| |||
Sbjct 261503 GTGCTGCGGTCGCTCGGCCA 261484
>seq59
Length=937750
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 61700 TTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCA 61759
|||| |||||||| ||||| ||||| || || || || || |||||||| || |
Sbjct 884572 TTCGCGAGGCGGTCGAGATCGAGCAGGAGTTCCTCACCGAGGCGCTGCCCGTCAAGCTTA 884513
Query 61760 TCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGG 61819
|||||||||| | | || |||| ||||| || || || || || ||||| || |
Sbjct 884512 TCGGCATGAACAGCGACCTCATGTGCCAGTACATCGAGTTCGTGGCAGACCGATTGCTTA 884453
Query 61820 TCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGA 61879
||| | || | || |||||| | | | | ||||| || || || ||||||||||
Sbjct 884452 TCGCACTCGGCAACGAGAAGATCTACCACAAGGAGAACCCGTTCGACTTTATGGACATGA 884393
Query 61880 TTTCGCTGGATGGCAAGACGAA 61901
| ||| |||| |||||||| ||
Sbjct 884392 TCTCGATGGAGGGCAAGACCAA 884371
>seq15
Length=278969
Score = 82.4 bits (90), Expect = 6e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
||||| | || ||||| ||||| |||||||| ||||| || ||||| || |||| |
Sbjct 243846 CATGTCCTCGCCTTCTTCGCCGCCTCGGACGGCATCGTGAACGAGAACTTGGTGGAGAGG 243905
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316
||| || |||||||| | | ||||| || ||||||||||| ||||||||
Sbjct 243906 TTCTCGGCCGAGGTGCAGATCGCCGAGGCCCGCTGTTTCTACGGTTTCCAGAT 243958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567704433040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |