Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 7e-12 >seq4 Length=1405664 Score = 87.8 bits (96), Expect = 7e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||| || ||||| |||| | ||||||||||||| | ||||||| || || Sbjct 1344232 CCGATGGTCATGCGCGAGGGGATGGCGTGAGGGTTGATGATCAGGTCAGGCGTGATACCC 1344173 Query 364484 TCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || |||| || |||||||| ||| || || | | | | || || || ||||| || | Sbjct 1344172 TCGGCGGAGAACGGCATATCCTCGTGGCGGTA-GGTAATCCCGATCGTACCCTTCTGACC 1344114 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | |||||| || |||||||| ||||| Sbjct 1344113 GTGGCGAGAGGCGAACTTGTCACCAAT 1344087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885482295934