Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq10 111 3e-22 >seq10 Length=541496 Score = 111 bits (122), Expect = 3e-22 Identities = 179/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||||||||| | | |||| ||| ||||| ||||| || || | || | || Sbjct 515531 TCGCCGTGGTTGCCTTGGTTGTTGGCCAGACCGAAGAGGCGTTCTTTCAGCATGCGGTCC 515590 Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCC-----TTGTCACTGAACC 164 | ||||||| || ||||||| | | ||| | || | |||||||||| | Sbjct 515591 TTCCCGTTCCAGAGTGCCAGGCTGAATC--CAAGG---CGACCGTGATTGTCACTGAGGC 515645 Query 165 CCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGT 224 | || | ||| || |||||||| ||| | || ||||| || || || || || ||||||| Sbjct 515646 CTGCGATGCCATCTTCGCCCCACCGGAATGCACGGCTACGCGCGTGCTCGTGCGGGAAGT 515705 Query 225 AGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGC 284 | ||| || || || | || |||||| ||||| ||||| |||| ||||| ||| Sbjct 515706 GCGACCAAGCATCCCCGTTTCCGGAGTAGTCCTCGCGTACCGTTGCCCACTGGCGCTCGG 515765 Query 285 TCAGGTAGGGGCCCCA 300 |||||||||||||| Sbjct 515766 AGAGGTAGGGGCCCCA 515781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007996663520