Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq281 425 1e-116 >seq281 Length=2648 Score = 425 bits (470), Expect = 1e-116 Identities = 281/310 (91%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| |||| |||||| | || |||||||||| Sbjct 1926 GAACGAGACCTTAACCTGCTAAATAGCCCGGCCGACTTTGGTTAGCTGCTGGCTTCTTAG 1985 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| | ||| || ||| | |||||||||||||||||||||||||||||||||||| Sbjct 1986 AGGGACTGTTGGCGTCTAGCTAACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 2045 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||| || Sbjct 2046 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAACGAGTTTATAACCTTGCCC 2105 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 2106 GAAAGGGCTGGGTAATCTTGTGAAACTTTGTCGTGCTGGGGATAGAGCATTGCAATTATT 2165 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 2166 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 2225 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 2226 GCCCTTTGTA 2235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947196864768