Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq130 293 2e-74 seq206 147 2e-30 >seq130 Length=202609 Score = 293 bits (324), Expect = 2e-74 Identities = 985/1512 (65%), Gaps = 26/1512 (2%) Strand=Plus/Minus Query 65423 TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGT 65482 |||| || ||||||||||||| || ||||| ||| |||| |||| |||| || Sbjct 61608 TTGACCACCTGGAACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCTCGTGTACGGC 61549 Query 65483 TCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACC 65542 |||||| | || || ||| || || || ||||| || || ||||| || |||| | Sbjct 61548 TCAAAGCACTCGTTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCATCGGTGCGAGC 61489 Query 65543 AACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC 65602 | | |||||||||| |||| | |||| ||| | | ||| |||||| |||| Sbjct 61488 AGAAGCGAGTTTCGCAGACCGTGGGTCGCAATCTTGCGCTTGAGCTCGGCCCAGTCCCAC 61429 Query 65603 ATCG-GTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGC 65661 | | | | ||| |||| || || | || | || || || ||||| Sbjct 61428 AGGGAGCTGGGCGT-GACACCC------CAGAGGTCGTACTGGAGCTCGCCCTGGCTGGC 61376 Query 65662 CGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTC 65721 || || | | | |||||| || |||||| |||| | || | ||| Sbjct 61375 TGGGCTGCCCTCGTACGTCTCGTACGGGCCAAGCTCCTTTGCAATCTCGCACGAGCGCTC 61316 Query 65722 GAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTG-CCTCATCGC 65780 ||| ||||| || ||||||||||| || | || || | | || |||| || Sbjct 61315 GAGGGCGGCGTGGTAGATGGTCTCGAAGATTTGAATGTTGAGC-CTCTTGGCCTCGGGGC 61257 Query 65781 TCTCGTACGGCATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCG 65839 | ||| | ||| || ||||| | | || | |||||| ||||| | || ||||| ||| Sbjct 61256 TGTCGAA-GGCGTAGCCCATGATCATGAATGCGTCGGCAAGACCGTTGACACCAATGCCG 61198 Query 65840 ATGGGACGATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATC 65898 |||||||| || |||| || || | ||| | |||| || ||||||||||| |||| || Sbjct 61197 ATGGGACGGTGGCGCATGTTCGA-CTTCTTGGCCTCGGGCACAGGGTAGTAGTTGACGTC 61139 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAA 65956 ||| || ||||| ||| ||| || | | || ||| || | | || Sbjct 61138 GATGATCTTGTTCAAGTTGGCACACACGACCTTG--GTAACCTCGTGCAGCTTCTTAAAG 61081 Query 65957 TCAAAATGTTTAGGAC-GATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGA 66015 || | | | || | || | | |||| | | | ||||||| || | | Sbjct 61080 TCGTACGTCCTTGCACCGGTCTCGGGATCCGG-CTTGATGTAGGTGGGAAGCGCGATACT 61022 Query 66016 TGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAG 66075 || ||||||||||| || | ||| ||||| || | ||||| | || || ||||| || Sbjct 61021 GGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATGATCTCCGTGCAGAG 60962 Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTT 66135 || ||| |||||||| | |||| || || |||||| ||| || ||||| Sbjct 60961 GTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTT 60902 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195 ||| | |||| | || |||| ||||| || | ||| | ||| |||| ||| || Sbjct 60901 GTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATAGCGTACCAGAGCTT 60842 Query 66196 GCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 | ||||| ||||| || |||| || | ||| ||||| | | ||| || || Sbjct 60841 CTGGGCCTTGACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTTGTGGTACAGAGCCTC 60782 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 ||| || || | || |||| || | || || | | || ||||| || ||||| Sbjct 60781 GAACTCCTCGCCATAGACGTCGGCAAGGCCGGGGCATTCGGCGGGGCACATAAGAGACCA 60722 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || || | ||| || || || ||| || || || || |||||||| ||||||||||| Sbjct 60721 CTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCCAGAGAGCGTAGAAGAG 60662 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 || || || || ||| || |||| || || ||||| | ||||||||||||||||| Sbjct 60661 CTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGTCGAGGAACTCAAAGAC 60602 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 ||| | ||||| || || | ||||||||| || | || || ||| ||||||||| Sbjct 60601 GTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCCGCTTGTTGCCACCTTG 60542 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 |||||| || | ||| |||||| |||| || | ||| || |||| ||||| || Sbjct 60541 GTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGCACGATGCCGTTGGAGAC 60482 Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC-CGTATATCGTGAACATTCAGACCAA 66614 || ||||| ||| | ||| || || ||||| || || ||| | || ||||| | Sbjct 60481 ACCGTTGGTACCGGCAATGTATGAACC-GGTGCCACGAATGCAGTGGATGTTGAGACCGA 60423 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTC 66672 | |||||||| ||||| ||| || || || | |||| | | ||||| || Sbjct 60422 TGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTC--GTAGATGCCCTC 60365 Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732 |||||||| |||| ||||| | |||| ||||||| | ||| || ||||||||| | Sbjct 60364 GATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTGCGGGTTGGGTGTGCC 60305 Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792 ||| |||||| || || | || || || ||||| | ||||| | ||||| || Sbjct 60304 GGCATTGAAGAGCGTCGGCGAGGCATGGGTGAAGTACTTCTCCGACATCAAGTTGTATGT 60245 Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTA 66852 ||| || | || |||| | ||| ||||| |||| ||| ||||| || | || Sbjct 60244 CTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAACACGCATGAGCATGTG 60185 Query 66853 TTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 ||||||| ||| ||| | | ||||| | | ||| ||||| || |||||||| Sbjct 60184 CTGAGGCCTCTCGGCCACCTTGCCGTTGATCCTGAGCAGGTACGAGCGCTCGAGGGTCTT 60125 Query 66913 GATACCAAAGTA 66924 || || ||||| Sbjct 60124 GAATCCGAAGTA 60113 >seq206 Length=170121 Score = 147 bits (162), Expect = 2e-30 Identities = 176/235 (75%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||||| |||||| |||| ||| Sbjct 152073 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCTGAGGAGATCGACTTG 152014 Query 61147 TCCAAAGACATGAATGACTGGGA----GCGTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||||| | | | ||| | ||| | || ||||| | Sbjct 152013 TCCAAGGACATGCACGACTGGGACAACAGGCTCAACGA-CAATGAGCGCCACTTCATCAG 151955 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || |||||||| || ||||||||||||||||| |||||| | | || || Sbjct 151954 CCACGTCCTTGCCTTCTTTGCTGCCTCGGACGGTATCGTCAACGAGAATCTCGTTGAGCG 151895 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| || | |||||||| | | ||||| || || ||||||||||||||||| Sbjct 151894 ATTCAGCTC-CGAGGTGCAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGAT 151841 Score = 104 bits (114), Expect = 2e-17 Identities = 384/593 (65%), Gaps = 13/593 (2%) Strand=Plus/Minus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || |||||| | ||||| |||| |||| | || || || || ||||| | || | Sbjct 151774 CAGGGAGAACATTCACTCAGAGACGTACTCGCTCCTGATTGACACCTACATTCGCGACCC 151715 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 || |||| || | ||| | ||||| ||||| || || | || |||| ||| || Sbjct 151714 TGCTCAACGCGAGTACCTCTTCGACGCCATTGAGACCATCCCCGTCGTCAAGCAGAAGGC 151655 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCTG 61497 || ||||| || |||||| || ||| | || || || | || || | | Sbjct 151654 CGACTGGGCTCTCCGATGGATCTCCG--ACACGGACTCGACGTTCGCGGAGCGCCTCGTT 151597 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | |||||||| | || ||| || || || || | || || ||| | Sbjct 151596 GCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATTTTCTGGCTC 151537 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| || |||||| ||| ||| |||| || |||||| Sbjct 151536 AAGAAGCGCGGTCTGATGCCCGGCCTCACCTTCTCCAACGAGCTGATCAGCCGAGACGAG 151477 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 ||| |||| || ||||| | || |||| || | || || || || Sbjct 151476 GGCTTGCACACCGACTTTGCCTGCCTCCTGTTCA---GCCACCTCCGAAAGCGGCCCCAC 151420 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 ||| ||| | | | || ||||| || || ||||| |||| || || || Sbjct 151419 CCGGA-CGTCGTCCTCCGCATCATCACCGAGGCTGTGACCATCGAGCAGGCCTTCCTCAC 151361 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 ||||| | |||||||| |||||||||||||| | | || ||| ||||| || || Sbjct 151360 CGACGCGCTCCCCGTCTCGCTCATCGGCATGAACTCGCGGCTCATGAGCCAGTACATCGA 151301 Query 61797 ATTTGTTGCCGACCGTCTGTTGG--TCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || ||||||||||| ||| | | ||| | || | || | | ||| || ||| Sbjct 151300 GTTCGTTGCCGACCGCCTGCTCGTTTCG-CTCGGCAACGACAAGCA-CTACAACGCGAGC 151243 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 ||||| || || || ||||| | || || || | ||||||||||| || || Sbjct 151242 AACCCGTTCGACTTTATGGAGAACATCTCTTTGCAGGGCAAGACGAACTTCTT 151190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566396185840