Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq56 113 2e-19 >seq56 Length=768257 Score = 113 bits (124), Expect = 2e-19 Identities = 241/353 (68%), Gaps = 8/353 (2%) Strand=Plus/Minus Query 88973 GCGCAAGTTCACCGCCGTGGGCCGAGAGTGCAGGGACAAGGCCGTGGTCGTGGTGGACGA 89032 |||||| || | |||| ||| | |||| || ||| ||| || | || ||||| Sbjct 321873 GCGCAAATTGAACGCCATGGCGCTCGAGTTTTCCGAGAAGAGCGTCCTCCTCGTCGACGA 321814 Query 89033 CTCTGTCGTGCGCGGCACCACATCCAAGTTCATAATCGACCTCCTTCGCAAGTCTGGCGC 89092 ||| |||||||||||||||| |||||| || ||| | | ||| | | ||||| Sbjct 321813 CTCCATCGTGCGCGGCACCACCTCCAAGGAGATTATCCAAATGGCGCGCGACGCGGGCGC 321754 Query 89093 CACCAAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTGTACGGCAT 89152 ||||||| | | || || || | || || ||||| || | |||||||||||||| Sbjct 321753 ACGCAAGGTCATCATGGCCTCCTGTGCGCCGCCCATCCGGCACTCGAACGTGTACGGCAT 321694 Query 89153 CGACATACCGTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGCACGAGGTGGCTCT 89212 |||||| || ||| | |||||| | || || ||| ||||| ||| ||||| || Sbjct 321693 CGACATGCCCTCGCGGCACGAGCTCGTCGCGCACGGCCGCTCCGAGGCCGAAGTGGC-CT 321635 Query 89213 CCT-CCTCGGAGCCGACCAGGTCATCTATCAGA--GTGTC-GACGACTTGCAAGCGGCCT 89268 ||| | || |||||||| |||||||| |||| || | ||| | | | | || | Sbjct 321634 CCTACATCCAAGCCGACCTCGTCATCTACCAGACCCTGCCGGACCTCATCGA--CAGCGT 321577 Query 89269 GTCGCCAGTTCAATCCCTCCATCACGGCCTTTGAGGCCTCTGTCTTTGTCGGC 89321 | ||||||||||| || ||||| | ||| || ||| ||||| | |||| Sbjct 321576 G-CGCCAGTTCAACCCGGCCATCGAGCGCTTCGACTGCTCCGTCTTCGACGGC 321525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084730143111138