Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq90 154 1e-32 seq3 93.3 3e-14 >seq90 Length=104559 Score = 154 bits (170), Expect = 1e-32 Identities = 342/501 (68%), Gaps = 23/501 (5%) Strand=Plus/Minus Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| | ||||| |||| ||| ||||||| || |||||||| | || | || Sbjct 11445 GAGAACATACACTCTGAGACCTACTCGCTTCTCATTGACACGTACATTAAAGATCCCGCT 11386 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 | || ||| | || | || ||||||||||| || || ||| ||||||| || Sbjct 11385 CAGCGCGAATACCTCTTTGACGCTATCGAGACGATCCCCTGTGTCAAGAGGAAAGCTGAG 11326 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAACG-GCTACATTTGGTGAACGATTGCTGGCATT 61502 ||||| || ||||| | | | || || || || || || || ||| | ||||| Sbjct 11325 TGGGCGCTCCGCTGGATTGCTGATG-ATCGTGCGACGTTCGGCGAGCGCTTGGTTGCATT 11267 Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAA 61562 || | ||||| || | || ||| || || || || ||||||||||||||||||| Sbjct 11266 CGCTGCCGTCGAAGGCATTTTCTTCTCGGGTTCCTTCGCTTCAATCTTTTGGTTGAAGAA 11207 Query 61563 ACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCAT 61622 ||||| || ||||| ||||| |||||||| |||||| |||| || |||||||| || Sbjct 11206 GCGTGGCCTCATGCCGGGTCTCACCTTCAGTAATGAGCTGATCAGCCGTGACGAGGGTAT 11147 Query 61623 GCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG-AG 61680 ||| || |||| |||| || || |||| || | || ||| ||||||| Sbjct 11146 GCACACCGACTTTGCCTGTCTT-CTCTTCA---GCCACCT------TCG-CCGTCGGCCA 11098 Query 61681 GAGCGTGTGGGT-----GAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 | | || | ||| || || || || || || || |||||||| || ||| Sbjct 11097 CACCCTGATATTCTCAAGAGAATCATTACGGAAGCCGTGACGATTGAACAGGAGTTCCTG 11038 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATAT 61793 || || || | || ||| |||||||||||||| | | | || |||| ||||| || Sbjct 11037 ACGGATGCGCTTCCGGTCAGCCTCATCGGCATGAA-CGCGAAGCTTATGTGCCAGTACAT 10979 Query 61794 TGAATTTGTTGCCGACCGTCT 61814 ||||||||||||||||||||| Sbjct 10978 TGAATTTGTTGCCGACCGTCT 10958 Score = 84.2 bits (92), Expect = 2e-11 Identities = 162/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| ||||||||||||||||||| | |||||| | || | Sbjct 11740 ATCTGGCAAATGTACAAGAAGACGGAAGCTTCCTTCTGGACCGCTGAGGAGATGGACCTC 11681 Query 61147 TCCAAAGACATGAATGACTGGGA----GCGTTTATCGAGCGGTGAACAACATTTCATTAA 61202 || || || | || || ||||| | ||| || | || | || ||||||| Sbjct 11680 TCGAAGGATCTTAACGATTGGGAAAATAAGCTTAATGA-CAACGAGCGTCACTTCATTAG 11622 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || || || ||||| ||||| || | | | || Sbjct 11621 CCACGTACTTGCTTTCTTCGCCGCCTCCGATGGCATCGTAAATGAAAACCTGGTCAAGCG 11562 Query 61263 -TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| || | || || || ||| | || ||||| || ||||| |||||||| || Sbjct 11561 CTTTAGC-AATGAAGTACAGGTGGCTGAAGCGCGCTGCTTCTATGGCTTCCAAAT 11508 >seq3 Length=168505 Score = 93.3 bits (102), Expect = 3e-14 Identities = 186/276 (67%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 66665 ATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTG 66724 ||||| || ||| ||| |||| ||| | |||| ||||||| || ||||||||||| Sbjct 119305 ATGCCTTCGATGCTATCATCCTTCATGCATACGAGGAAGCATGAGCTGAGTTGGGGTTTT 119246 Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784 || ||| |||| ||| || || || | |||||||| || || | | |||||| | Sbjct 119245 GGAGTGCCGGCGTTGAAAAGAGTCGGACTCGCGTGCGTGAAATATCGCTGTGACATGAGA 119186 Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATC 66844 ||||| ||||||| | || || | ||||| || |||| ||| ||||| Sbjct 119185 TTGTAGGTCTCGACCGCTCGCTCGATATCACGACCATGGATACCGACAGCAACACGCATG 119126 Query 66845 AGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCC 66904 || | || |||||||| ||| | | | | ||||| | | ||| ||||| || Sbjct 119125 AGCATGTGTTGAGGCCTCTCGGCAATCTTGCCGTTGATTCTGAGAAGGTATGAGCGCTCA 119066 Query 66905 AGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || ||||| | |||||||| ||| | ||||||| Sbjct 119065 AGAGTCTTAAAGCCAAAGTATTGGTAGTGGAAATCG 119030 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || || || || |||||||| || ||||| ||||| || || || ||| || | || Sbjct 119679 AAGAGGTCCGGAATCCAGAGAGCATAGAACAGATCACGAGCACGAACCTCTTCCTTACCA 119620 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || |||||||| | ||| ||||||||||||| || |||||||| || || | |||||| Sbjct 119619 TGGTTTTTGCGAAGGTCAAGGAACTCAAAGACATCCGCATGCCAAGGCTCAATATAGATG 119560 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCG 66511 ||| | || ||| ||| ||| || || || ||||| || ||| Sbjct 119559 CAGAAGGCACCAGGACGCTTGTTGCCTCCCTGATCAACGTATCGGGCG 119512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566948556880