Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 206 2e-48 seq1 206 2e-48 seq8 165 6e-36 seq21 141 7e-29 >seq3 Length=1901115 Score = 206 bits (228), Expect = 2e-48 Identities = 376/545 (69%), Gaps = 9/545 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| || Sbjct 1720549 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCGTTCTGGACTGCCGAGGAGATGGATCTG 1720490 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || || ||| | | |||||| || || | | ||| | ||| | || ||||| Sbjct 1720489 TCGAAGGACCTTCACGACTGGCAGAACCGCATGAACGA-CAATGAGCGCCACTTCATCTC 1720431 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || |||||||||||||| ||||| | | || || Sbjct 1720430 CCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTCCTCGAGCG 1720371 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | ||||| ||||| | ||||| || || |||||||| |||||||| || Sbjct 1720370 TTTCTCTGGCGAGGTCCAAGTCCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCATGAT 1720311 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| |||||||||| || |||||| | ||| || Sbjct 1720310 GGAGAACATCCACTCCGAGACCTACTCCCTTCTCATCGACACCTACATCCGCGAGGCCGC 1720251 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 || || || | | ||||| ||| ||||||| || || || ||| || ||| | Sbjct 1720250 CGAGCGCGAGCATCTCTTCAACGCCGTCGAGACCATCCCCTGTGTCGCGCGCAAGGCGCA 1720191 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGG--CTACATTTGGTGAACGATTGCTGGCA 61500 ||||| || ||||||| | || || | || | || ||| || | | || Sbjct 1720190 GTGGGCTCTCCGGTGGATCA--ACGACGACCGTTCTTCCTTCGGTATCCGCCTCGTCGCT 1720133 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | ||||||||| | || ||| || |||||| ||||| ||| | ||| Sbjct 1720132 TTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCAGCTTTGCCAGCATCTTCTGGCTCAAG 1720073 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || || || || ||||||||||| |||||| ||| ||| | || | ||||||||||| Sbjct 1720072 AAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCACTCGCGACGAGGGG 1720013 Query 61621 ATGCA 61625 ||||| Sbjct 1720012 ATGCA 1720008 Score = 86.0 bits (94), Expect = 5e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 61745 TGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTG 61804 |||||||| ||||| |||||||| | || |||| ||||| || || || || | Sbjct 1719841 TGCCCGTCAGCCTCATTGGCATGAACTCGACGCTTATGTGCCAGTACATCGAGTTCGTCG 1719782 Query 61805 CCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTG 61864 ||||||| ||| | |||| | || | || | | || || || ||||| || | Sbjct 1719781 CCGACCGCCTGCTCGTCGCCCTCGGCAACGAGAAGGTGTACAACGTGACGAACCCGTTCG 1719722 Query 61865 ATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 | |||||||||||||| ||||| | |||||||| || || || ||||| ||||| Sbjct 1719721 ACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTTGAGAAGCGTGT 1719667 >seq1 Length=3010126 Score = 206 bits (228), Expect = 2e-48 Identities = 368/534 (69%), Gaps = 5/534 (1%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 ||||| || |||| |||| ||||| |||||| |||||| || | | | ||| Sbjct 2094129 ATGTATAAGCAGGCTCAAGCATCCTTTTGGACGTCGGAGGAAATCACCCTCGCATATGAC 2094188 Query 61156 ATGAATGACTGG---GAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTT 61211 ||| |||||| || || | | ||| | |||| ||||| || ||||| || | Sbjct 2094189 ATGCGCGACTGGACGGAACGACTGAACGA-CAACGAACGCCATTTTATCAAACACGTCCT 2094247 Query 61212 GGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCA 61271 ||| ||||| ||||| || || || || ||||| ||||| | | || || || | | Sbjct 2094248 GGCTTTCTTCGCCGCCTCCGATGGGATTGTCAACGAGAACCTCGTTGAGCGCTTTTCCAA 2094307 Query 61272 GGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGT 61331 ||||| || | | |||||||||| || ||||||||||||||||| |||||||| | Sbjct 2094308 CGAGGTTCAGGCGGCGGAGGCGCGCTGCTTCTACGGCTTCCAGATAATGATGGAGAACAT 2094367 Query 61332 CCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGA 61391 |||||||| | ||| | |||||||| || ||||||| ||| | ||| || || Sbjct 2094368 TCACTCGGAAACCTACTCCCTACTCATCGACACCTACATCAAGGACCCTCAGGAGCGAGA 2094427 Query 61392 ACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTT 61451 | | ||| |||||||||||| || ||| | ||||| || ||||| ||||| | Sbjct 2094428 CCACCTCTTCGCTGCCATCGAGACAATTCCGTGCATCAAGCGCAAGGCGGACTGGGCGCT 2094487 Query 61452 CAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 | |||| | | | | | | || || | |||||| | |||| || || | || Sbjct 2094488 TAGATGGAACTCTGACAAATCATCGACGTTCGCGGAACGACTCGTGGCGTTCGCCGCTGT 2094547 Query 61512 CGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACT 61571 || || |||| ||| ||| || || ||||| ||||| ||| ||||||| || || || Sbjct 2094548 GGAAGGGATATTCTTCTCTGGGTCCTTCGCCGCTATCTTCTGGCTGAAGAAGCGCGGGCT 2094607 Query 61572 TATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 |||||| ||||| |||||| ||| ||| | || |||||||| |||||||| Sbjct 2094608 TATGCCTGGTCTCACCTTCTCCAACGAGCTCATCAGTCGCGACGAAGGCATGCA 2094661 >seq8 Length=1038518 Score = 165 bits (182), Expect = 6e-36 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || || ||||| ||||| ||||||||||| || ||||| || || |||||||| ||||| Sbjct 199104 AAGAGGTCAGGGATCCAAAGGGCGTAGAACAGGTCGCGGGCACGCTGCTCCTCCTTGCCG 199045 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || || | ||||||||||||||| |||| ||||| ||||| || || |||||||| Sbjct 199044 TGGTTCTTCCTCAAGTCGAGGAACTCGAAGACGTCGGGGTGCCACGGCTCGAGGTAGATA 198985 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 || |||| ||| ||| ||| |||||| |||||||||||||| || || | | Sbjct 198984 GCAAACGCCCCCGGACGCTTGTTGCCACCCTGGTCGACGTAGCGCGCAGTGGCGTCGTAC 198925 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 | || | ||| || |||| ||||| || | ||| ||||| ||| ||||| Sbjct 198924 GCGCGAAGCATAGGCACGATACCGTTCGAGTAGCCGTTGGTACCGGCGATG 198874 >seq21 Length=547483 Score = 141 bits (156), Expect = 7e-29 Identities = 373/559 (67%), Gaps = 13/559 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || ||| ||||||||| || | ||||| || |||||||| | || ||| | || | Sbjct 164513 ATCTGGGCCATGTACAAGAAAGAAGAAGCGTCTTTCTGGACCGCAGAAGAGATGGACCTC 164572 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||||| ||| | | ||| | || | || ||||| Sbjct 164573 TCCAAGGACCTCCACGACTGGGAAGAGCGCATGAACGA-CAACGAGCGGCACTTCATCTC 164631 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || ||||| |||||||| ||||| | | || Sbjct 164632 CCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCAACGAGAACCTGCTCACCCG 164691 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||||| | || | |||||||| || ||||||||||||||||| | Sbjct 164692 CTTCT-GCGGCGAGGTCAAGGTCCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGA 164750 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| || |||||||||| |||| | |||||||| ||||||||| | || | | Sbjct 164751 TGGAGAACGTGCACTCGGAGACGTACTCCCTCCTCATCGACACGTACATCCGCGACCCCG 164810 Query 61382 CGGAACGTGAACGAT--TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 | | | | ||| | | |||| ||| ||||||| || ||| ||| ||| || Sbjct 164811 CCCA--GCGCACGTTCCTCCTCAACGCCGTCGAGACCATCCCGTGCGTGCGCAAGAAGGC 164868 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACG-GCTACATTTGGTGAACGATTGCTGG 61498 ||| ||||| | |||||| | | | || | | |||| ||| | | | Sbjct 164869 GGAGTGGGCGCTGCGCTGGATC-GCGGATCGGCGCTCGAGCTTTGCGATACGGCTCATCG 164927 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | || ||| ||| ||||| | || ||| || ||||| ||||||||| ||| Sbjct 164928 CGTTCTCGGCGGTGGAGGGGATTTTCTTCTCGGGCAGCTTTGCGAGCATCTTTTGGCTGA 164987 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| || || | ||||| || |||| ||| || ||| | || | |||||||||| Sbjct 164988 AGAAGCGGGGGTTGATGCCTGGGTTGACGTTCTCGAACGAGCTCATCACGCGCGACGAGG 165047 Query 61619 GCATGCATTGTGATTTTGC 61637 |||||||| || ||||| Sbjct 165048 GCATGCATACCGACTTTGC 165066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566885567200