Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq25 167 1e-38 seq26 136 2e-29 >seq25 Length=187162 Score = 167 bits (184), Expect = 1e-38 Identities = 145/181 (80%), Gaps = 11/181 (6%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | ||||||||||||||||| ||||||||| ||||||| |||||||| | ||| ||| Sbjct 124941 TTCAAAGAGTCGAGTTGTTTGGGMATGCAGCTCAAAATGGGTGGTAAATTCCCTCTGAAG 125000 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| |||| ||| |||||||||| |||||| |||| ||| |||| |||||||| Sbjct 125001 CTAAATAGTGGCGAGAAACCGATAGCGAACAAGTGCCGTGAGGGAAGGATGGAAAGCACT 125060 Query 154 TTGG-----AAAGAGAGTTAAAAAG------CACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||| |||||||||| || || | |||||||||||||||||||| || || Sbjct 125061 TTGGAAATCAAAGAGAGTTGAACAGTGTACTTATGTGAAATTGTTGAAAGGGAAACGATT 125120 Query 203 G 203 | Sbjct 125121 G 125121 >seq26 Length=171544 Score = 136 bits (150), Expect = 2e-29 Identities = 92/103 (89%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 101 TTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAA 160 ||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||| Sbjct 24308 TTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAAA 24367 Query 161 GAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||||||||| || | |||||||||||||||||||| || ||| Sbjct 24368 GAGAGTTAAACAGTATGTGAAATTGTTGAAAGGGAAACGATTG 24410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998477050