Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20iseilematis-
ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq410 237 2e-60
>seq410
Length=648
Score = 237 bits (262), Expect = 2e-60
Identities = 187/220 (85%), Gaps = 3/220 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| |
Sbjct 470 GTACAAAGGGCAGGGACGTAGTCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 413
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||| ||| | || ||||||| ||||| || ||||| ||| ||
Sbjct 412 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAAAGTTTCACAAGTTT 353
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | | | |||| ||||| | |||||||| | ||||||||||||||||||
Sbjct 352 ACCCAGTCATTTCGGACAAGGGGCCCCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 293
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219
|||| |||||||||||||||||||||||||||||||||||
Sbjct 292 GCCCGGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751887723580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |