Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20iseilematis-
ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2369 370 4e-100
seq14222 206 1e-50
>seq2369
Length=338
Score = 370 bits (410), Expect = 4e-100
Identities = 251/280 (90%), Gaps = 6/280 (2%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||
Sbjct 295 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 236
Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527
| | ||| |||||||||||| |||||||| || | |||||||||||||||||||
Sbjct 235 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCGATC 178
Query 528 CTGATGTCTTCGGA----TGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583
|| | ||||| | |||||||||||||||||||| |||||||||||||||||||||
Sbjct 177 CTCACGTCTTTTAAGTCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATGG 118
Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 117 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTC 58
Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| |||||||||||||||||||||||||||||||||||||
Sbjct 57 TGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 18
>seq14222
Length=211
Score = 206 bits (228), Expect = 1e-50
Identities = 144/164 (88%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||| | ||||||||||||||||||||||||||| ||||||| ||||||| | ||||| |
Sbjct 209 TTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAGG 150
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| |||
Sbjct 149 CTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 90
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
||| ||||||||||||| || ||||||||||| |||||||||
Sbjct 89 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 46
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079669412600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |