Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq410 295 1e-77 >seq410 Length=648 Score = 295 bits (326), Expect = 1e-77 Identities = 224/261 (86%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 325 ACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAGA 266 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGCCA-- 118 ||||||||||||| | ||||| || || | | || |||||||||||||| || Sbjct 265 CCTGTTATTGCCTTTTGCCTCCATCACCTAGACGGTCGATTGTCCCTCTAAGAAGACATA 206 Query 119 GCCACCAACCATA-GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | ||||| | | ||| | | ||||||||||||| |||||||||||||||||||||| Sbjct 205 GGGGCCAACAAAATGTCAACCCGTCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGGAA 146 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 145 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 86 Query 238 AGAAAGAGCTATCAATCTGTC 258 ||||| || ||||||||||| Sbjct 85 TGAAAGCGCCATCAATCTGTC 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796681034772