Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20iseilematis-
ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq462 333 5e-89
seq1322 125 1e-26
seq682 100 5e-19
>seq462
Length=590
Score = 333 bits (368), Expect = 5e-89
Identities = 206/219 (94%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59
||||||| ||||||| || | || ||| ||||||||||||||||||||||||||
Sbjct 372 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 431
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 432 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 491
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 551
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218
|||||||||||||||||||||||||||||||||||||||
Sbjct 552 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 590
>seq1322
Length=397
Score = 125 bits (138), Expect = 1e-26
Identities = 75/79 (95%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 397 TAACTTTTCTGGCACCTCTAGCCTCAAATGCCGAGGATCTAAAGGATCGATAGGCCACAC 338
Query 277 TTTCATGGTTTGTATTCAC 295
|||||||||||||||||||
Sbjct 337 TTTCATGGTTTGTATTCAC 319
>seq682
Length=492
Score = 100 bits (110), Expect = 5e-19
Identities = 60/63 (95%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTACGTTT 60
Query 224 TCT 226
||
Sbjct 61 CCT 63
Score = 82.4 bits (90), Expect = 1e-13
Identities = 51/55 (93%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 438 TAACTTTTCTGGCACCTCTAGCCTCAAATGCCGAGGATCTAAAGGATCGATAGGC 492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854268319872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |