Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-18 >seq1 Length=422913 Score = 98.7 bits (108), Expect = 1e-18 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 54 CAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATC 113 |||| ||| |||||||| ||||| | | ||||||||| |||||||||| |||||| || Sbjct 227382 CAGGTTCGGCGCCGGCGCCTCTTCGATGATCTTCTGGTGCCGACGTTGCACCGAGCAGTC 227441 Query 114 GCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTG 173 ||| ||| | || || |||| ||| || ||||| | || |||||||| ||||| Sbjct 227442 GCGCTCGGAGATGTAGACCGCGTTGCCGTGCGTGTCGGCGAACACCTGCACTTCGACGTG 227501 Query 174 ACGTGGGTTGGTCAGGTACTTTTC 197 || || ||| ||||||||||| Sbjct 227502 GCGGGGAGCGGTGAGGTACTTTTC 227525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735890112440