Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20iseilematis-
ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq1467 120 8e-25
>seq1467
Length=386
Score = 120 bits (132), Expect = 8e-25
Identities = 155/208 (75%), Gaps = 17/208 (8%)
Strand=Plus/Plus
Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC-----CAACAAAGTGGG 249
||| ||| ||||||||||||||| ||||||||||| |||| | | |||
Sbjct 166 AAACTAACTCGCTGACCCATTATGCAAAAGGTACGTTGTCATTTTTTACTAAAAA----- 220
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC-TCTCCGGGGTTC 308
|||| ||||||| || | ||| |||||| ||||||||||| | ||| | | |
Sbjct 221 CTCCAACTGCTTATAGGATTACTAGTTCAGGTTCTATTTCACTAGTCATCTACT---TAC 277
Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCA-GTAGTATTTAGCCTT 367
||||| |||||| |||||| |||| |||||||||| | || || || || ||||||||
Sbjct 278 TTTTCACCTTTCACTCACGTTACTC-TTCACTATCGCT-AGACATGTTATACTTAGCCTT 335
Query 368 GGAGGATGGTCCCCCCATATTCAGACAA 395
|||||||||| ||||| |||||| ||||
Sbjct 336 GGAGGATGGTACCCCCTTATTCATACAA 363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241408644608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |