Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq8 134 3e-29 >seq8 Length=303545 Score = 134 bits (148), Expect = 3e-29 Identities = 183/253 (72%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||||||||||||||||||| |||| || ||||| || |||||||||| || | ||| Sbjct 62002 TTCACCGTGGTTGCCCTCGTTGTTGGCGAGACCGAAAAGACGCTCCTTGAGCATGCGATC 61943 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCG-CCTTGTCACTGAACCCCG 167 ||||||| ||||||| || ||| | ||| | | | ||||| || || | Sbjct 61942 CTTTCCGTTCCAGAGGGCCAAGCTCAGAC-CCATCCTGCAGTGGTTGTCCGAGAGACCGG 61884 Query 168 CCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | || || ||||| ||||| ||| ||| ||||| || || || |||||||||| | Sbjct 61883 CGAGACCATCCTCACCCCATCGGAAGGTACGGCTACGAGCCGACTCGTGGGGGAAGTGAG 61824 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 ||||||||| || | ||| ||| ||||| || || || ||||| || || ||||| | Sbjct 61823 ACCAGGCGTCACCGTTGGCCGAGTAATCTTCACGAACGGTACCCCACTGACGCTCGCTGA 61764 Query 288 GGTAGGGGCCCCA 300 ||||||| ||||| Sbjct 61763 GGTAGGGACCCCA 61751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007844647040