Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20iseilematis-
ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq410 309 6e-82
>seq410
Length=648
Score = 309 bits (342), Expect = 6e-82
Identities = 259/314 (82%), Gaps = 5/314 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCC--GGCTTCT 76
|| ||||||||| ||||||||||||| | || | ||| | || | | | |||||
Sbjct 156 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACATTTTGTTGGCCCCTATGTCTTCT 215
Query 77 TAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134
||||||||| |||| | || || |||||| | |||||||||||||||||||||||
Sbjct 216 TAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGATGC 275
Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194
|||||||||||| |||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct 276 CCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGGGCCCCTT 335
Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254
| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| |||
Sbjct 336 GTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGTAAT 395
Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314
| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| |||||
Sbjct 396 TTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTACGT 455
Query 315 CCCTGCCCTTTGTA 328
||||||||||||||
Sbjct 456 CCCTGCCCTTTGTA 469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947054017536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |