Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq141 385 4e-102 seq75 192 5e-44 >seq141 Length=34748 Score = 385 bits (426), Expect = 4e-102 Identities = 1223/1864 (66%), Gaps = 68/1864 (4%) Strand=Plus/Minus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 ||||||||||| || || | || | |||||| | || ||||| | ||||||||||| Sbjct 31438 GTGAACTGGATGGCGTTGGAGGCAGGCTTGGTACGGAGGTAGTAGGTACCGGTCTTGAGA 31379 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACA 65203 || ||| | ||||| |||||||| | | | || | | || | | | Sbjct 31378 CCCTTCTTCCATCCGTAGAAGTGCATCGAGGTGAGCTGACCAAAGGTGGGTGCCGAAAGG 31319 Query 65204 TGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATG 65263 || || || | |||||| ||| |||| || |||||| || ||||||||||||||| Sbjct 31318 TGGATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCAGCCATGTCAATG 31259 Query 65264 ATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGA-A 65321 || | | || | | ||||||||||||||||||||||| | | | | | || | Sbjct 31258 ATG-GCCTTCTGGCTGATCTCCCAGACGGTCTTGTACAG-CTTCTTGATGCGGTCGGGGA 31201 Query 65322 TCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTG 65381 | | | || ||||| ||||||| | || || ||||| || ||| | || Sbjct 31200 TGCCGGGCACGTTCTGGATGGAACCACCGTGGGCGATGATGCGGTTCTTCATGGTGTCGT 31141 Query 65382 ACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCGC 65441 ||||| |||| |||| || | | | ||| | |||| ||| |||||||| | Sbjct 31140 TCCACAGACCCTGCTCGACGAGCTCGCGGAGCAACCAGGGGTTGACGACCTGGAACTCAC 31081 Query 65442 CGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGC 65501 ||| || |||||||| ||||| ||||| ||| || || ||| | || || || Sbjct 31080 CGGCGAGCACACGACGCGAGTAGATATTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGC 31021 Query 65502 CTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATC 65561 | || || || || || ||||| ||||||||||||| | | ||||| || | | Sbjct 31020 CCAGGATCTGACTGGTGGAGGCAGTAGGCATGGGAGCGAGGAGGAGCGAGTTGCGAAGAC 30961 Query 65562 CGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCG 65617 ||| | | | || ||| ||| || ||| |||||| ||| | |||| | | Sbjct 30960 CGTGCTTGGCGATCTTGGCCTTGA-GC---TCGGCCCAGTCCCAAA--GGTTCGAGGGGG 30907 Query 65618 ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG----CCGGTGAACCGAG 65673 | ||| |||||| || | || || || |||| | || || ||| Sbjct 30906 TGA--CACC--CCACATGTCGTACTGGAGCTCACC----CTGGGAAGCGGGCGAGCCGGC 30855 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCGGCAA 65732 | | | ||||| || | ||||| || || | || | | | |||||| ||||| Sbjct 30854 GTAGGTCTCGTAGGTGCCGTGCTCCTGAGCCAGCTCGCACGATCG-CTCGAGGGCGGCGT 30796 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 || ||||||||||| || | || || ||| ||||| |||| | | | Sbjct 30795 GGTAGATGGTCTCGAAGATCTGGACGTTGAGACGACGAGCCTCGGGCGACTCGAAAG-CG 30737 Query 65793 TA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || ||||| | | || | |||||| ||||| || || || ||||||||||||||||| Sbjct 30736 TAGCCCATGATCATGAAGGCGTCGGCGAGACCCTGGACACCGATACCGATGGGACGATGG 30677 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| ||||| | | ||||| || |||||||| ||||| ||||| || || Sbjct 30676 CGCATGTTGGACCTGCGAGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTG 30617 Query 65912 AAATTGCGTGTCACCACATGCAC---GATACGTCGC--AATTGTTCGAAATCAAAATGTT 65966 | || | || || ||| | | || ||| | | | ||| || Sbjct 30616 AGGTT-CTTG----CAGATGGCCTTGGCGACCTCGTGGAGACGCTTGAAGTCG------- 30569 Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 |||| | | || || ||| | | || |||| ||||| | || || | ||||| Sbjct 30568 TAGGTC--TTGG---TGACGGGGTCGATGAAGGTGGGGAGGGCGATGGAAGCCAAGTTGC 30514 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 |||| || | |||||| || || | ||||||| || |||||||||| || ||| Sbjct 30513 AGACGGCGACCTCGTCGGGGGCACTGTACTCGATGATCTCGGTGCACAAGTTGGAGCACT 30454 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 |||||||| | |||| || || |||||||| ||| || |||||||| | ||| Sbjct 30453 TGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAGAGGATGA 30394 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206 | || | || ||||| |||||||| | |||||||| ||| || | ||||| | Sbjct 30393 AGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTGA 30334 Query 66207 CCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCAC 66266 | || || || | || | | ||||| | |||||||| | ||||| || | Sbjct 30333 CAGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCGAACTCGTCGC 30274 Query 66267 CCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326 | | |||| |||| || |||| || || ||||| || ||||| ||||| | || Sbjct 30273 CGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAGGGACCAGTCACCGTTCT 30214 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 | || ||||| ||| || ||||| || | |||||||||||||||||| || || || | Sbjct 30213 GCTCGACACGCTTCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGAGCAC 30154 Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | |||||| | ||||| || ||||| | ||||||||||||||||| ||| | |||| Sbjct 30153 GAACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCC 30094 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 |||| || | ||||||||| || | || ||| ||| |||||| ||||||||||||| Sbjct 30093 ATGGCTCAATGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGC 30034 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 | ||| ||||||||||| || | ||| || |||| ||||| || ||||||| Sbjct 30033 GGGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTGCTAACACCGTTGGTGC 29974 Query 66567 CGTCGATGGGGGATCCTCGTGCC-CGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 || | ||| ||| || ||||| || || ||| | || ||||| ||||||||||| Sbjct 29973 CGGCAATGTAGGAGCCA-GTGCCACGGATGCAGTGGATGTTGAGACCGATACCACCGGCG 29915 Query 66626 GTCTTCGAGATGGCAGCACAA-TCGGCCAC-TGTCCGGAATATGCCGTCAATGGAGTCAC 66683 ||||| ||||| || || || | |||| | | |||||||| |||||||| Sbjct 29914 GTCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTC--GTAGATGCCGTCGATGGAGTCGT 29857 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 |||| ||||| | |||| | || || || || || | || || |||| ||||| Sbjct 29856 CCTTCATGGTGACGAGGAAACACGACGAGAGCTGCGGGTGAGGGGTACCGGCGTTGAAGA 29797 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 ||||||| | ||||| |||||||| | | |||||| ||||| ||||||||| | Sbjct 29796 GGGTGGGCGAGGCGTGGGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCGATGGCGC 29737 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCG- 66861 | |||| | || || || |||| || ||| ||||| || | || || || || Sbjct 29736 TGGCGATGTCCTGACCGTGGATACCGACGGCGACA-CGCATGAGCATGTGCTGGGGACGC 29678 Query 66862 --TTCGACC-AGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACC 66918 | ||||| |||| ||||| | | | ||||||||| || |||||||||| || Sbjct 29677 TCTGCGACCTTGCCG----TTGATGCGGAGGAGGTAGGAGCGCTCGAGGGTCTTGAAGCC 29622 Query 66919 AAAG 66922 ||| Sbjct 29621 GAAG 29618 >seq75 Length=98333 Score = 192 bits (212), Expect = 5e-44 Identities = 375/546 (69%), Gaps = 11/546 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | ||||| |||| | Sbjct 63971 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAAATCGACCTC 64030 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||||| | | | ||| | || | || ||||| Sbjct 64031 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAACGA-CAACGAGCGTCACTTCATCTC 64089 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || |||||||||||||| ||||| | | || || Sbjct 64090 CCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTTGTCGAGCG 64149 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| || | | || | || | | ||||| ||||| |||||||| |||||||| | Sbjct 64150 TTTCAGCTCTGAAGTT-CAGGCCGCCGAGGCCCGTTGCTTCTACGGTTTCCAGATCATGA 64208 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| |||||||||||| ||| | |||||||| || |||||| | |||| | Sbjct 64209 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATCCGTGAGCCCG 64268 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | | || || | || | ||| ||||||| || || | || |||| ||| || | Sbjct 64269 AGCAGCGCGAGTTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAGGCTG 64328 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA-CG-GCTACATTTGGTGAACGATTGCTGGC 61499 | ||||| || ||||||| | |||| || || | || | || || | | || Sbjct 64329 ACTGGGCTCTCCGATGGATCAGC--GACAAGCGCGCCTCTTTCGCCGAGCGTCTCGTTGC 64386 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | ||||||||| | || ||| || || || ||| | ||||| ||| | || Sbjct 64387 CTTCGCCGCTGTCGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATCTTCTGGCTCAA 64446 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| ||||| || ||||||||||| || ||| ||| ||| | || || || ||||| || Sbjct 64447 GAAGCGTGGTCTCATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCGCGTGACGAAGG 64506 Query 61620 CATGCA 61625 |||| Sbjct 64507 TCTGCA 64512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397493323311680