Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq25 230 4e-58 >seq25 Length=141646 Score = 230 bits (254), Expect = 4e-58 Identities = 186/220 (85%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 11088 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 11145 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||| | || ||||||| ||||| | ||||| ||| || Sbjct 11146 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAGAGTTTCACAAGTTT 11205 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | | |||| ||||| || |||||||| | |||||||||||||||||| Sbjct 11206 ACCCAGTCATTTCGGACAAGG-GACCCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 11264 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||| ||||||||||||||||||||||||||||||||||| Sbjct 11265 GCCCGGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 11304 Score = 230 bits (254), Expect = 4e-58 Identities = 186/220 (85%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 23116 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 23173 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||| | || ||||||| ||||| | ||||| ||| || Sbjct 23174 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAGAGTTTCACAAGTTT 23233 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | | |||| ||||| || |||||||| | |||||||||||||||||| Sbjct 23234 ACCCAGTCATTTCGGACAAGG-GACCCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 23292 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||| ||||||||||||||||||||||||||||||||||| Sbjct 23293 GCCCGGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 23332 Score = 114 bits (126), Expect = 2e-23 Identities = 85/97 (88%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| ||| Sbjct 2628 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 2685 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCA 97 ||||||||||| ||| |||| ||| | || || |||| Sbjct 2686 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATACCCA 2722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999497335