Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq25 286 6e-75 >seq25 Length=141646 Score = 286 bits (316), Expect = 6e-75 Identities = 219/257 (85%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120 ||| |||||||| ||||||||||||||||||||||||||||||||||| | | | ||||| Sbjct 3835 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 3776 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || | Sbjct 3775 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 3716 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||| ||||| || |||||| | |||||| | ||||||||||||| Sbjct 3715 CCGTAATGATTAACAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 3656 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||| |||||| ||||||||||||| || ||||| |||||||||||||||| Sbjct 3655 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 3596 Query 301 GTGAACGAAAGTTAGGG 317 ||||||| ||||||| Sbjct 3595 -AGAACGAAGGTTAGGG 3580 Score = 286 bits (316), Expect = 6e-75 Identities = 219/257 (85%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120 ||| |||||||| ||||||||||||||||||||||||||||||||||| | | | ||||| Sbjct 11996 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 11937 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || | Sbjct 11936 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 11877 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||| ||||| || |||||| | |||||| | ||||||||||||| Sbjct 11876 CCGTAATGATTAACAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 11817 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||| |||||| ||||||||||||| || ||||| |||||||||||||||| Sbjct 11816 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 11757 Query 301 GTGAACGAAAGTTAGGG 317 ||||||| ||||||| Sbjct 11756 -AGAACGAAGGTTAGGG 11741 Score = 286 bits (316), Expect = 6e-75 Identities = 219/257 (85%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120 ||| |||||||| ||||||||||||||||||||||||||||||||||| | | | ||||| Sbjct 24024 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 23965 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || | Sbjct 23964 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 23905 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||| ||||| || |||||| | |||||| | ||||||||||||| Sbjct 23904 CCGTAATGATTAACAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 23845 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||| |||||| ||||||||||||| || ||||| |||||||||||||||| Sbjct 23844 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 23785 Query 301 GTGAACGAAAGTTAGGG 317 ||||||| ||||||| Sbjct 23784 -AGAACGAAGGTTAGGG 23769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199368512