Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq25 372 1e-100 >seq25 Length=141646 Score = 372 bits (412), Expect = 1e-100 Identities = 251/279 (90%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 1101 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 1042 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| |||||||||||| |||||||| || | ||||||||||||||| ||| Sbjct 1041 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCAATC 984 Query 528 CTGATGTCTTCGGAT---GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 || | ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 983 CTCACGTCTTTAGATCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATGGT 924 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 923 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 864 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||||||||||||||||||| Sbjct 863 GACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 825 Score = 372 bits (412), Expect = 1e-100 Identities = 251/279 (90%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 9584 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 9525 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| |||||||||||| |||||||| || | ||||||||||||||| ||| Sbjct 9524 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCAATC 9467 Query 528 CTGATGTCTTCGGAT---GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 || | ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 9466 CTCACGTCTTTAGATCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATGGT 9407 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 9406 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 9347 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||||||||||||||||||| Sbjct 9346 GACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 9308 Score = 372 bits (412), Expect = 1e-100 Identities = 251/279 (90%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 21612 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 21553 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| |||||||||||| |||||||| || | ||||||||||||||| ||| Sbjct 21552 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCAATC 21495 Query 528 CTGATGTCTTCGGAT---GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 || | ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 21494 CTCACGTCTTTAGATCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATGGT 21435 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 21434 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 21375 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||||||||||||||||||| Sbjct 21374 GACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 21336 Score = 372 bits (412), Expect = 1e-100 Identities = 251/279 (90%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 32172 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 32113 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| |||||||||||| |||||||| || | ||||||||||||||| ||| Sbjct 32112 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCAATC 32055 Query 528 CTGATGTCTTCGGAT---GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 || | ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 32054 CTCACGTCTTTAGATCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATGGT 31995 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 31994 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 31935 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||||||||||||||||||| Sbjct 31934 GACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 31896 Score = 210 bits (232), Expect = 9e-52 Identities = 145/164 (88%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||||||| | ||||| | Sbjct 1529 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAGG 1470 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 1469 CTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 1410 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| ||||||||||||| || ||||||||||| ||||||||| Sbjct 1409 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 1366 Score = 210 bits (232), Expect = 9e-52 Identities = 145/164 (88%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||||||| | ||||| | Sbjct 9989 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAGG 9930 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 9929 CTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 9870 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| ||||||||||||| || ||||||||||| ||||||||| Sbjct 9869 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 9826 Score = 210 bits (232), Expect = 9e-52 Identities = 145/164 (88%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||||||| | ||||| | Sbjct 22017 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAGG 21958 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 21957 CTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 21898 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| ||||||||||||| || ||||||||||| ||||||||| Sbjct 21897 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 21854 Score = 210 bits (232), Expect = 9e-52 Identities = 145/164 (88%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||||||| | ||||| | Sbjct 32577 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAGG 32518 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 32517 CTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 32458 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| ||||||||||||| || ||||||||||| ||||||||| Sbjct 32457 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 32414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998519950